Metadata-Version: 2.4
Name: pysb
Version: 1.16.0
Summary: Python Systems Biology modeling framework
Home-page: http://pysb.org/
Author: Jeremy Muhlich
Author-email: jmuhlich@bitflood.org
Keywords: systems,biology,model,rules
Classifier: Development Status :: 5 - Production/Stable
Classifier: Environment :: Console
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: BSD License
Classifier: Operating System :: OS Independent
Classifier: Programming Language :: Python :: 3
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: Topic :: Scientific/Engineering :: Chemistry
Classifier: Topic :: Scientific/Engineering :: Mathematics
Requires-Python: >=3.6
Description-Content-Type: text/x-rst
License-File: LICENSE.txt
Requires-Dist: numpy
Requires-Dist: scipy>=1.1
Requires-Dist: sympy>=1.6
Requires-Dist: networkx
Dynamic: author
Dynamic: author-email
Dynamic: classifier
Dynamic: description
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Dynamic: keywords
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PySB
====

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Python Systems Biology modeling framework

http://pysb.org/

PySB (pronounced "Pie Ess Bee") is a framework for building rule-based
mathematical models of biochemical systems. It works nicely with
scientific Python libraries such as NumPy, SciPy and SymPy for model
simulation and analysis.

Installation
------------

PySB depends on the following:

  * numpy
  * scipy
  * sympy
  * Perl - http://www.perl.org/get.html
  * BioNetGen - http://bionetgen.org/

For full instructions, see the Installation chapter of the manual at
http://docs.pysb.org/en/latest/installation.html

Documentation
-------------

The manual is available online at http://docs.pysb.org/. You can also
generate the documentation locally by installing Sphinx and running
the following commands::

    $ cd doc
    $ make html

Then open _build/html/index.html in your web browser.
