## Description

This track shows a reference alignment of the mouse genome vs. the human genome constructed from the Mouse Translated Blat Alignments track.

## Methods

The track was constructed by selecting the best-scoring blat alignment for each aligned position in the genome. Mouse insertions were included in the reference alignment when they followed the last base of a blat block, although this process has not been entirely perfected.

## Credits

This track was produced at UCSC. Mouse sequence data were provided by the Mouse Genome Sequencing Consortium.

## References

Kent, W.J. BLAT - the BLAST-like alignment tool. Genome Res. 12(4), 656-664 (2002).