# GenBank/RefSeq Update Build

These pages describe of building the GenBank and RefSeq tracks for a new genome database.

- Genome setup - How to setup a new genome or new assembly
- Configuration file - Configuration file for GenBank alignment and update process.

# GenBank/RefSeq Update Implementation

This describes the process of automatic, incrementally updating the genome databases from GenBank and RefSeq.

### Overview

- Goals
- Annoying issues
- Directory structure
- Implementation
- Error handling
- ignore index

### Process Overview

The steps are divided into two categories; genome-independent and genome- dependent. The genome-independent task involve downloading and processing of data. Genome-dependent task are specific to a genome and assembly and involve alignment sequence and database updates.

Process Steps:

1. download
2. data processing
3. alignment
4. database update

### Deployment

- Deployment
- Tables involved