EMBOSS

| NUCLEIC COMPOSITION

Composition of nucleotide sequences

Program name | Description
--- | ---
banana | Plot bending and curvature data for B-DNA
btwisted | Calculate the twisting in a B-DNA sequence
chaos | Draw a chaos game representation plot for a nucleotide sequence
compseq | Calculate the composition of unique words in sequences
dan | Calculates nucleic acid melting temperature
density | Draw a nucleic acid density plot
freak | Generate residue/base frequency table or plot
isochore | Plots isochores in DNA sequences
sirna | Finds siRNA duplexes in mRNA
wordcount | Count and extract unique words in DNA sequence(s)