@cwd /usr/pkg
@name hisat2-2.2.1nb4
@blddep python313-3.13.11
@pkgdep python313>=3.13
@blddep digest-20220214
@blddep mktools-20250213
@blddep bash-5.3.9
@blddep gmake-4.4.1
@blddep perl-5.42.0nb1
@blddep cwrappers-20220403
@blddep simde-0.8.2
@comment $NetBSD: PLIST,v 1.3 2023/05/17 21:55:34 bacon Exp $
bin/hisat2
@comment MD5:3b9df7fbeec99ea30fe85cdbe991e820
bin/hisat2-align-l
@comment MD5:8f6bae190522d615186e821cdc4eceaf
bin/hisat2-align-s
@comment MD5:9684147992396d04c4004bd64fa674c3
bin/hisat2-build
@comment MD5:89ed519c12ff528d86fa7ff3398bb355
bin/hisat2-build-l
@comment MD5:1016f6c4990eda801c0dd08e24d70193
bin/hisat2-build-s
@comment MD5:571c34d799c9da13d0aac9d5d76fc5d6
bin/hisat2-inspect
@comment MD5:b4a209f78079f73d090d919a7c091796
bin/hisat2-inspect-l
@comment MD5:7dc268ac6fcc3eaaefe2f7139c240bb7
bin/hisat2-inspect-s
@comment MD5:a686acc899979c78a902a67f69e50c64
bin/hisat2-repeat
@comment MD5:34f65bfbb5d965f6ba42c40007ae1afc
libexec/hisat2/convert_quals.pl
@comment MD5:f2c17aeb717e73e14aaf34893d431484
libexec/hisat2/extract_exons.py
@comment MD5:ebc042ac51d27def7019792cd4bb5dc9
libexec/hisat2/extract_splice_sites.py
@comment MD5:6e5f75ca1d1df96d464a2786ebf17955
libexec/hisat2/gen_2b_occ_lookup.pl
@comment MD5:63938acd874f5a9ad96e04c36a110e7e
libexec/hisat2/gen_occ_lookup.pl
@comment MD5:5dd48dc3e319007ba967e2241f5579f7
libexec/hisat2/gen_solqual_lookup.pl
@comment MD5:6383b57c076474f890168c44a768216f
libexec/hisat2/hisat2_extract_exons.py
@comment MD5:ebc042ac51d27def7019792cd4bb5dc9
libexec/hisat2/hisat2_extract_snps_haplotypes_UCSC.py
@comment MD5:7a21f93e8320dc76081d7ae23308781d
libexec/hisat2/hisat2_extract_snps_haplotypes_VCF.py
@comment MD5:1dcbf7c7290d0481347b7bde5b12d76f
libexec/hisat2/hisat2_extract_splice_sites.py
@comment MD5:6e5f75ca1d1df96d464a2786ebf17955
libexec/hisat2/hisat2_read_statistics.py
@comment MD5:a946a35e93b48a563393d8d68b0ff7a9
libexec/hisat2/hisat2_simulate_reads.py
@comment MD5:9c9f2c1cb4e6fe70883a6d6ce190dc74
libexec/hisat2/infer_fraglen.pl
@comment MD5:7f5ba1803c47db5fae2f6fe535018571
libexec/hisat2/make_a_thaliana_tair.sh
@comment MD5:6d784660b0a981aeaacbed78a0079d6b
libexec/hisat2/make_b_taurus_UMD3.sh
@comment MD5:c340e02ff752fcfeb0bedb5249b26f4d
libexec/hisat2/make_bdgp6.sh
@comment MD5:fa29cda841acfd30657ec31300ef31ca
libexec/hisat2/make_bdgp6_tran.sh
@comment MD5:d46105102c5548d4523db641b452c54a
libexec/hisat2/make_canFam2.sh
@comment MD5:d86f84178b2376d1ccc29c6bb1cc6304
libexec/hisat2/make_ce10.sh
@comment MD5:13124b7c392644a8d0cadfe1a48426b8
libexec/hisat2/make_dm6.sh
@comment MD5:3a7a980fe09a5e73241b397a7fd248d5
libexec/hisat2/make_e_coli.sh
@comment MD5:7ff70e42c4d443b1638589d9caeb504a
libexec/hisat2/make_grch37.sh
@comment MD5:1a69bb36b87eb022d99f9e6ef8c1f2ce
libexec/hisat2/make_grch37_snp.sh
@comment MD5:a996574b50d0c7cd74237e7fe4c85a3d
libexec/hisat2/make_grch37_snp_tran.sh
@comment MD5:6bbd78ad0ae22237b391563b4914908a
libexec/hisat2/make_grch37_snp_tran_ercc.sh
@comment MD5:5bd92d2c21cad97cea18f5d9d8a29c72
libexec/hisat2/make_grch37_tran.sh
@comment MD5:b199d70a5051eba8f03299d7c15cfccf
libexec/hisat2/make_grch38.sh
@comment MD5:e34a6d811e2e615b55373240f3a74718
libexec/hisat2/make_grch38_rep.sh
@comment MD5:4d192cb497da28729a14c57fa86512ad
libexec/hisat2/make_grch38_snp.sh
@comment MD5:a7fff051ac79cd94670a74caf07122a2
libexec/hisat2/make_grch38_snp_rep.sh
@comment MD5:473aede92e2e6259fbd49312031ee351
libexec/hisat2/make_grch38_snp_tran.sh
@comment MD5:d19a160b5e4f0bd230408b5f9954048f
libexec/hisat2/make_grch38_snp_tran_ercc.sh
@comment MD5:41ef0c11299283b7485c1744f3b962f2
libexec/hisat2/make_grch38_tran.sh
@comment MD5:eb30eecd6ecf7c706ccfd60ff9670b6f
libexec/hisat2/make_grcm38.sh
@comment MD5:1c9f72456c0b821eb07f15d8a53be80b
libexec/hisat2/make_grcm38_snp.sh
@comment MD5:53fc4107912b753984ab3526c2dd7740
libexec/hisat2/make_grcm38_snp_tran.sh
@comment MD5:1b3adc4bc5bf636c402c5202394e65b8
libexec/hisat2/make_grcm38_tran.sh
@comment MD5:4607f2cd33e146fad1b55c5c8d0834cf
libexec/hisat2/make_hg19.sh
@comment MD5:d351a683798bb26690ba3fe49e580bd4
libexec/hisat2/make_hg38.sh
@comment MD5:b0fc99098b53084042c85944d6b73621
libexec/hisat2/make_hg38_allsnp.sh
@comment MD5:9217311701d1dbe55b1a3872e737f161
libexec/hisat2/make_hg38_snp.sh
@comment MD5:12b51f5fdfa488ea85f52a830884ea11
libexec/hisat2/make_hg38_snp_tran.sh
@comment MD5:19c800b769c9cfbf464e39fbb20e53e6
libexec/hisat2/make_mm10.sh
@comment MD5:ff68a14f24496e39e53dcce1d3b97834
libexec/hisat2/make_mm9.sh
@comment MD5:37f27d3430076dadc3e5f35b13b50c03
libexec/hisat2/make_r64.sh
@comment MD5:f56982f67dc429df158a8ba87f2b912c
libexec/hisat2/make_r64_tran.sh
@comment MD5:7dae59183798a1e01c7d94c79034a8aa
libexec/hisat2/make_rn4.sh
@comment MD5:7abb76c4721c4e6ec085cdd39c46edd0
libexec/hisat2/make_rn6.sh
@comment MD5:5b8ca643a18a8a5cc3906022fcccab3c
libexec/hisat2/make_rnor6.sh
@comment MD5:bb2b2a789f0cb2a7476066561d0caeaa
libexec/hisat2/make_rnor6_tran.sh
@comment MD5:745f887165fef7bae96e9b052a333869
libexec/hisat2/make_sc3.sh
@comment MD5:9d7e1216bc909df32c2ded79b0c7a548
libexec/hisat2/make_wbcel235.sh
@comment MD5:ad66bbc1345da2d0113aa453bfe82cd5
libexec/hisat2/make_wbcel235_tran.sh
@comment MD5:ef0cdb859ea79f43daee471fe561ed55
libexec/hisat2/make_zm3_snp_tran_ercc.sh
@comment MD5:27f6d7b5c236f60f2d4f95f3df5e55f0
libexec/hisat2/sa.py
@comment MD5:a6d1742cf7a8db019c4ffbc781f1bbfd
libexec/hisat2/validate_repeat.py
@comment MD5:f515d7cfc5ce139d14a3ca3e5cc09da5
@cwd /usr/pkg
@ignore
+COMMENT
@ignore
+DESC
@ignore
+BUILD_VERSION
@ignore
+BUILD_INFO
@ignore
+SIZE_PKG
@ignore
+SIZE_ALL
