org.biojava.bio.seq.io.agave

Class AGAVEXrefs

java.lang.Object

org.biojava.bio.seq.io.agave.AGAVEXrefs

public class AGAVEXrefs
extends java.lang.Object

xrefs

Author:

Hanning Ni Doubletwist Inc, Greg Cox

Constructor Summary

Constructors

Constructor and Description
AGAVEXrefs()

Method Summary

Methods

Modifier and Type	Method and Description
void	addDbId(AGAVEDbId id) add @param id
void	addXref(AGAVEXref xref) add @param xref
java.util.Iterator	getDbIds() return a set of DbId
java.util.Iterator	getXrefs() return a set of AGAVEXref
java.lang.String	toString() the agave xml representation of xrefs
java.lang.String	toString(java.lang.String indent, java.lang.String indent_unit)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

AGAVEXrefs

public AGAVEXrefs()

Method Detail

addDbId

public void addDbId(AGAVEDbId id)

add @param id

addXref

public void addXref(AGAVEXref xref)

add @param xref

getDbIds

public java.util.Iterator getDbIds()

return a set of DbId

getXrefs

public java.util.Iterator getXrefs()

return a set of AGAVEXref

toString

public java.lang.String toString(java.lang.String indent,
                        java.lang.String indent_unit)

Parameters:

indent - the leading space

indent_unit - the unit of indenting for xml format

toString

public java.lang.String toString()

the agave xml representation of xrefs

Overrides:

toString in class java.lang.Object