org.biojava.bio.program

Class PdbToXMLConverter

java.lang.Object

org.biojava.bio.program.PdbToXMLConverter

public class PdbToXMLConverter
extends java.lang.Object

A class that converts Protein Data Bank (PDB) to XML that will validate against the biojava:MacromolecularStructure DTD.

Note this code is experimental and subject to change without notice.

Copyright © 2000 Cambridge Antibody Technology.

Primary author -

• Simon Brocklehurst (CAT)

Other authors -

• Tim Dilks (CAT)
• Colin Hardman (CAT)
• Stuart Johnston (CAT)

This code was first released to the biojava.org project, July 2000.

Version:

0.1

Author:

Cambridge Antibody Technology (CAT)

See Also:

BlastLikeSAXParser, SimpleXMLEmitter

Constructor Summary

Constructors

Constructor and Description
PdbToXMLConverter(java.lang.String poInput) Creates a new BlastToXMLConverter instance.

Method Summary

Modifier and Type	Method and Description
void	convert()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

PdbToXMLConverter

public PdbToXMLConverter(java.lang.String poInput)

Creates a new BlastToXMLConverter instance.

Method Detail

convert

public void convert()
             throws java.io.IOException,
                    org.xml.sax.SAXException

Throws:

java.io.IOException

org.xml.sax.SAXException