org.biojava.bio.program.gff3

Interface GFF3Record

All Superinterfaces:

Annotatable, Changeable

All Known Implementing Classes:

GFF3Record.Impl

public interface GFF3Record
extends Annotatable

A record in a GFF3 formatted file.

Author:

Matthew Pocock

Nested Class Summary

Nested Classes

Modifier and Type	Interface and Description
static class	GFF3Record.Impl

Nested classes/interfaces inherited from interface org.biojava.bio.Annotatable

Annotatable.AnnotationForwarder

Field Summary

Fields inherited from interface org.biojava.bio.Annotatable

ANNOTATION

Method Summary

Modifier and Type	Method and Description
int	getEnd()
int	getPhase()
double	getScore()
java.lang.String	getSequenceID()
Term	getSource()
int	getStart()
StrandedFeature.Strand	getStrand()
Term	getType()

Methods inherited from interface org.biojava.bio.Annotatable

getAnnotation

Methods inherited from interface org.biojava.utils.Changeable

addChangeListener, addChangeListener, isUnchanging, removeChangeListener, removeChangeListener

Method Detail

getSequenceID

java.lang.String getSequenceID()

getSource

Term getSource()

getType

Term getType()

getStart

int getStart()

getEnd

int getEnd()

getScore

double getScore()

getStrand

StrandedFeature.Strand getStrand()

getPhase

int getPhase()