Package org.biojava.bio.structure.gui

Class BiojavaJmol

  • public class BiojavaJmol
extends java.lang.Object
    A class that provides a simple GUI for Jmol
    Since:
    1.6
    Author:
    Andreas Prlic

    • Field Summary

      Fields 
      Modifier and Type Field Description
      static java.lang.String adapter  
      static java.lang.String smartAdapter  
      static java.lang.String viewer  

    • Constructor Summary

      Constructors 
      Constructor Description
      BiojavaJmol()  

    • Method Summary

      All Methods Static Methods Instance Methods Concrete Methods 
      Modifier and Type Method Description
      void evalString​(java.lang.String rasmolScript)  
      static boolean jmolInClassPath()
      returns true if Jmol can be found in the classpath, otherwise false.
      static void main​(java.lang.String[] args)  
      void setStructure​(Structure s)  
      void setTitle​(java.lang.String label)  

      • Methods inherited from class java.lang.Object

        clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

    • Constructor Detail

      • BiojavaJmol

        public BiojavaJmol()

    • Method Detail

      • main

        public static void main​(java.lang.String[] args)

      • jmolInClassPath

        public static boolean jmolInClassPath()
        returns true if Jmol can be found in the classpath, otherwise false.
        Returns:
        true/false depending if Jmol can be found

      • evalString

        public void evalString​(java.lang.String rasmolScript)

      • setStructure

        public void setStructure​(Structure s)

      • setTitle

        public void setTitle​(java.lang.String label)