Uses of Class
org.biojava.bio.structure.io.mmcif.model.ChemComp

Packages that use ChemComp

Package	Description
org.biojava.bio.structure.io.mmcif	Input and Output of mmcif files
org.biojava.bio.structure.io.mmcif.chem

Uses of ChemComp in org.biojava.bio.structure.io.mmcif

Methods in org.biojava.bio.structure.io.mmcif that return ChemComp

Modifier and Type	Method	Description
ChemComp	ChemicalComponentDictionary.getParent(ChemComp c)	Get the parent of a component.
ChemComp	ChemicalComponentDictionary.getReplaced(java.lang.String id)
ChemComp	ChemicalComponentDictionary.getReplaced(ChemComp c)	if ChemComp is replacing another one, get the old version otherwise return the same ChemComp again.
ChemComp	ChemicalComponentDictionary.getReplacer(java.lang.String id)
ChemComp	ChemicalComponentDictionary.getReplacer(ChemComp c)	if ChemComp is replaced by another one, get the newer version otherwise return the same ChemComp again.

Methods in org.biojava.bio.structure.io.mmcif with parameters of type ChemComp

Modifier and Type	Method	Description
void	ChemicalComponentDictionary.addChemComp(ChemComp comp)	add a new component to the dictionary
ChemComp	ChemicalComponentDictionary.getParent(ChemComp c)	Get the parent of a component.
ChemComp	ChemicalComponentDictionary.getReplaced(ChemComp c)	if ChemComp is replacing another one, get the old version otherwise return the same ChemComp again.
ChemComp	ChemicalComponentDictionary.getReplacer(ChemComp c)	if ChemComp is replaced by another one, get the newer version otherwise return the same ChemComp again.
boolean	ChemicalComponentDictionary.isReplaced(ChemComp c)
boolean	ChemicalComponentDictionary.isReplacer(ChemComp c)
void	ChemCompConsumer.newChemComp(ChemComp c)
void	MMcifConsumer.newChemComp(ChemComp c)
void	SimpleMMcifConsumer.newChemComp(ChemComp c)
void	SimpleMMcifParser.triggerNewChemComp(ChemComp cc)

Uses of ChemComp in org.biojava.bio.structure.io.mmcif.chem

Methods in org.biojava.bio.structure.io.mmcif.chem with parameters of type ChemComp

Modifier and Type	Method	Description
static java.lang.Character	ChemCompTools.getOneLetterCode(ChemComp cc, ChemicalComponentDictionary dictionary)
static boolean	ChemCompTools.isStandardChemComp(ChemComp cc)