Package org.biojavax.bio.seq.io

Class UniProtCommentParser.Isoform

  • Enclosing class:
    UniProtCommentParser
    public static class UniProtCommentParser.Isoform
extends java.lang.Object
    A class to describe isoforms for alternative product comments.

    • Constructor Summary

      Constructors 
      Constructor Description
      Isoform()
      Creates a new instance.

    • Method Summary

      All Methods Instance Methods Concrete Methods 
      Modifier and Type Method Description
      java.util.List getIsoIDs()
      Getter for property isoIDs.
      java.util.List getNames()
      Getter for property names.
      java.lang.String getNote()
      Getter for property note.
      java.lang.String getSequenceRef()
      Getter for property sequenceRef.
      java.lang.String getSequenceType()
      Getter for property sequenceType.
      void setIsoIDs​(java.util.List isoIDs)
      Setter for property isoIDs.
      void setNames​(java.util.List names)
      Setter for property names.
      void setNote​(java.lang.String note)
      Setter for property note.
      void setSequenceRef​(java.lang.String sequenceRef)
      Setter for property sequenceRef.
      void setSequenceType​(java.lang.String sequenceType)
      Setter for property sequenceType.

      • Methods inherited from class java.lang.Object

        clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

    • Constructor Detail

      • Isoform

        public Isoform()
        Creates a new instance.

    • Method Detail

      • getNames

        public java.util.List getNames()
        Getter for property names.
        Returns:
        Value of property names.

      • setNames

        public void setNames​(java.util.List names)
        Setter for property names.
        Parameters:
        names - New value of property names.

      • getIsoIDs

        public java.util.List getIsoIDs()
        Getter for property isoIDs.
        Returns:
        Value of property isoIDs.

      • setIsoIDs

        public void setIsoIDs​(java.util.List isoIDs)
        Setter for property isoIDs.
        Parameters:
        isoIDs - New value of property isoIDs.

      • getSequenceType

        public java.lang.String getSequenceType()
        Getter for property sequenceType.
        Returns:
        Value of property sequenceType.

      • setSequenceType

        public void setSequenceType​(java.lang.String sequenceType)
        Setter for property sequenceType.
        Parameters:
        sequenceType - New value of property sequenceType.

      • getSequenceRef

        public java.lang.String getSequenceRef()
        Getter for property sequenceRef.
        Returns:
        Value of property sequenceRef.

      • setSequenceRef

        public void setSequenceRef​(java.lang.String sequenceRef)
        Setter for property sequenceRef.
        Parameters:
        sequenceRef - New value of property sequenceRef.

      • getNote

        public java.lang.String getNote()
        Getter for property note.
        Returns:
        Value of property note.

      • setNote

        public void setNote​(java.lang.String note)
        Setter for property note.
        Parameters:
        note - New value of property note.