Uses of Class
org.biojava.bibliography.BibRefException

Packages that use BibRefException
Package
Description
org.biojava.bibliography
The data structures and interfaces included in this package define an interoperable framework for bibliographic searches.

  • Uses of BibRefException in org.biojava.bibliography

    Methods in org.biojava.bibliography that throw BibRefException
    Modifier and Type
    Method
    Description
    void
    BibRefQuery.connect()
    It creates a connection to a bibliographic repository, or/and it makes all necessary initialization steps needed for further communication.
    void
    BibRefQuery.connect(byte[] collectionId)
    It creates a connection to a bibliographic repository, or/and it makes all necessary initialization steps needed for further communication, and it makes the collection described by collectionId the current collection.
    void
    BibRefSupport.connect()
    It creates a connection to an object providing the supporting utilities, or/and it makes all necessary initialization steps needed for further communication.
    void
    BibRefQuery.destroy()
    It frees all resources related to this query collection.
    BibRefQuery
    BibRefQuery.find(String[] keywords, String[] attrs, Hashtable properties)
    The easiest direct method for querying a repository.
    BibRefQuery
    BibRefQuery.findByAuthor(BiblioProvider author, Hashtable properties)
    This is a convenient method for a common query.
    BibRef
    BibRefQuery.findById(String bibRefId)
    This is a convenient method returning just one citation.
    BibRef
    BibRefQuery.findById(String bibRefId, String[] onlyAttrs)
    This is a convenient method returning just one citation, perhaps with a limited number of attributes.
    BibRef[]
    BibRefQuery.getAllBibRefs()
    It returns all citations from the current collection as a (possibly big) array.
    BibRef[]
    BibRefQuery.getAllBibRefs(String[] onlyAttrs)
    It returns all citations from the current collection as a (possibly big) array, perhaps with a limited number of attributes.
    InputStream
    BibRefQuery.getAllBibRefsAsXML()
    It returns all citations from the current collection as an XML stream.
    String[]
    BibRefQuery.getAllIDs()
    A convenient method returning just identifiers of all current citations.
    String
    BibRefQuery.getBibRefAsXML(BibRef bibRef)
    A convenient utility method converting a given citation to its XML representation.
    int
    BibRefQuery.getBibRefCount()
    It returns the number of citations in the current collection.
    Enumeration
    BibRefQuery.getBibRefs()
    It returns an enumeration of all citations from the current collection.
    Enumeration
    BibRefQuery.getBibRefs(String[] onlyAttrs)
    It returns an enumeration of all citations from the current collection, perhaps with a limited number of attributes.
    Enumeration
    BibRefQuery.getBibRefsAsXML()
    It returns an enumeration of all citations from the current collection.
    BiblioCriterion[]
    BibRefSupport.getSupportedCriteria()
    It returns all supported searching and sorting criteria for the whole bibliographic repository.
    BiblioCriterion[]
    BibRefSupport.getSupportedCriteria(String repositorySubset)
    It returns all supported searching and sorting criteria in the given repository subset.
    CandyVocabulary
    BibRefSupport.getSupportedValues(String resourceType, String attrName)
    It returns a controlled vocabulary containing all possible values of the attribute given in attrName in the context given in resourceType.
    CandyFinder
    BibRefSupport.getVocabularyFinder()
    It returns an object representing a central place where all controlled vocabularies can be received from and shared by all users.
    BibRefQuery
    BibRefQuery.query(String query, Hashtable properties)
    It queries the current collection using a query language.
    BibRefQuery
    BibRefQuery.sort(String[] orderedBy, Hashtable properties)
    It sorts the current collection and returns another collection which is a sorted copy of the current collection.
    BibRefQuery
    BibRefSupport.union(BibRefQuery[] collections, Hashtable properties)
    It merges all given collections together.