Uses of Class
org.biojava.bio.dp.twohead.Cell

Packages that use Cell
Package
Description
org.biojava.bio.dp.twohead
 

  • Uses of Cell in org.biojava.bio.dp.twohead

    Methods in org.biojava.bio.dp.twohead that return Cell
    Modifier and Type
    Method
    Description
    Cell[][]
    AbstractMatrixPairDPCursor.press()
     
    Cell[][]
    LightPairDPCursor.press()
    Returns the minimal context of the DP matrix necessary to compute the value of a single point in that matrix.
    Cell[][]
    PairDPCursor.press()
    press out a new correctly sized cell array
    Methods in org.biojava.bio.dp.twohead with parameters of type Cell
    Modifier and Type
    Method
    Description
    void
    CellCalculator.calcCell(Cell[][] cells)
    Calculate the 'scores' array in the cell at cells[0][0].
    void
    CellCalculator.initialize(Cell[][] cells)
    Initialize the cell at [0][0] to the recursion initial parameters.
    void
    BackMatrixPairDPCursor.next(Cell[][] cells)
     
    void
    LightPairDPCursor.next(Cell[][] cells)
    Description of the Method
    void
    MatrixPairDPCursor.next(Cell[][] cells)
     
    void
    PairDPCursor.next(Cell[][] cells)
    retrieve the next block of cells