Uses of Interface
org.biojava.bio.gui.sequence.PairwiseRenderContext
Packages that use PairwiseRenderContext
Package
Description
Graphical displays of biological sequences and associated annotations.
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Uses of PairwiseRenderContext in org.biojava.bio.gui.sequence
Classes in org.biojava.bio.gui.sequence that implement PairwiseRenderContextModifier and TypeClassDescriptionclassAPairwiseSequencePanelis a panel that displays a pair of sequences; one sequence (the primary) may be either left-to-right (HORIZONTAL) or from top-to-bottom (VERTICAL).classSubPairwiseRenderContextis a rendering context which wraps a delegate context and effectively hides some of the delegate's properties with its own.Methods in org.biojava.bio.gui.sequence that return PairwiseRenderContextModifier and TypeMethodDescriptionprotected PairwiseRenderContextPairwiseFilteringRenderer.getSubContext(PairwiseRenderContext context) getSubContextcreates a new context which hasFeatureHolders filtered using the current filter.Methods in org.biojava.bio.gui.sequence with parameters of type PairwiseRenderContextModifier and TypeMethodDescriptionprotected PairwiseRenderContextPairwiseFilteringRenderer.getSubContext(PairwiseRenderContext context) getSubContextcreates a new context which hasFeatureHolders filtered using the current filter.voidCrosshairRenderer.paint(Graphics2D g2, PairwiseRenderContext context) voidPairwiseDiagonalRenderer.paint(Graphics2D g2, PairwiseRenderContext context) paintrenders the feature as a simple line.voidPairwiseFilteringRenderer.paint(Graphics2D g2, PairwiseRenderContext context) voidPairwiseOverlayRenderer.paint(Graphics2D g2, PairwiseRenderContext context) paintapplies all renderers in the order in which they were added.voidPairwiseSequenceRenderer.paint(Graphics2D g2, PairwiseRenderContext prc) paints some or all of the information about the sequence pair.CrosshairRenderer.processMouseEvent(PairwiseRenderContext context, MouseEvent me, List path) processMouseEventprocesses anyMouseEvents directed to the renderer.PairwiseDiagonalRenderer.processMouseEvent(PairwiseRenderContext context, MouseEvent me, List path) processMouseEventacts on a mouse gesture.PairwiseFilteringRenderer.processMouseEvent(PairwiseRenderContext context, MouseEvent me, List path) PairwiseOverlayRenderer.processMouseEvent(PairwiseRenderContext context, MouseEvent me, List path) processMouseEventproduces aSequenceViewerEventin response to a mouse gesture.PairwiseSequenceRenderer.processMouseEvent(PairwiseRenderContext prc, MouseEvent me, List path) processMouseEventproduces aSequenceViewerEventin response to a mouse gesture.Constructors in org.biojava.bio.gui.sequence with parameters of type PairwiseRenderContextModifierConstructorDescriptionSubPairwiseRenderContext(PairwiseRenderContext context, SymbolList symbols, SymbolList secondarySymbols, FeatureHolder features, FeatureHolder secondaryFeatures, RangeLocation range, RangeLocation secondaryRange) Creates a newSubPairwiseRenderContext.