Uses of Interface
org.biojava.bio.program.gff.GFFRecordFilter
Packages that use GFFRecordFilter
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Uses of GFFRecordFilter in org.biojava.bio.program.gff
Classes in org.biojava.bio.program.gff that implement GFFRecordFilterModifier and TypeClassDescriptionstatic classImplementation of GFFRecordFilter that accepts everything.static classImplementation of GFFRecordFilter that accepts records based upon the feature field.static classstatic classstatic classImplementation of GFFRecordFilter that accepts records based upon the sequence name.static classImplementation of GFFRecordFilter that accepts records based upon the source field.static classFields in org.biojava.bio.program.gff declared as GFFRecordFilterModifier and TypeFieldDescriptionstatic final GFFRecordFilterGFFRecordFilter.ACCEPT_ALLA GFFRecordFilter that accepts everything.Methods in org.biojava.bio.program.gff that return GFFRecordFilterMethods in org.biojava.bio.program.gff with parameters of type GFFRecordFilterModifier and TypeMethodDescriptionGFFEntrySet.filter(GFFRecordFilter filter) Filter this entry set into another set.static GFFEntrySetGFFTools.readGFF(BufferedReader gffIn, GFFRecordFilter recFilt) Read all GFF entries matching a filter from a buffered reader.static GFFEntrySetGFFTools.readGFF(File inFile, GFFRecordFilter recFilt) Reads a GFFEntrySet from a file with the specified filter.static GFFEntrySetGFFTools.readGFF(String fileName, GFFRecordFilter recFilt) Deprecated.use: readGff(File,GFFRecordFilter)voidGFFRecordFilter.NotFilter.setFilter(GFFRecordFilter filter) Constructors in org.biojava.bio.program.gff with parameters of type GFFRecordFilterModifierConstructorDescriptionGFFFilterer(GFFDocumentHandler handler, GFFRecordFilter filter) Create a new GFFFilterer that will forward to handler everything that filter accepts.NotFilter(GFFRecordFilter filter)