org.biojava.bio.program.homologene.AbstractOrthoPairCollection

An abstract implementation of the OrthoPairCollection interface. Its primary role is to implement the filter() method.i

Nested Class Summary

Nested classes/interfaces inherited from interface org.biojava.bio.program.homologene.OrthoPairCollection
OrthoPairCollection.Iterator
Constructor Summary

Constructors

Constructor

Description

AbstractOrthoPairCollection()
Method Summary

Modifier and Type

Method

Description

abstract void

add(OrthoPairSet group)

abstract boolean

contains(OrthoPairSet group)

OrthoPairCollection

filter(OrthoPairSetFilter filters)

abstract boolean

isEmpty()

abstract OrthoPairCollection.Iterator

iterator()

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details
- AbstractOrthoPairCollection
  
  public AbstractOrthoPairCollection()
Method Details
- add
  
  public abstract void add(OrthoPairSet group)
  
  Specified by:
  
  add in interface OrthoPairCollection
- contains
  
  public abstract boolean contains(OrthoPairSet group)
  
  Specified by:
  
  contains in interface OrthoPairCollection
- isEmpty
  
  public abstract boolean isEmpty()
  
  Specified by:
  
  isEmpty in interface OrthoPairCollection
- iterator
  
  public abstract OrthoPairCollection.Iterator iterator()
  
  Specified by:
  
  iterator in interface OrthoPairCollection
- filter
  
  public OrthoPairCollection filter(OrthoPairSetFilter filters)
  
  Specified by:
  
  filter in interface OrthoPairCollection

Class AbstractOrthoPairCollection

Nested Class Summary