Uses of Interface
org.biojava.bio.program.homologene.Taxon
Packages that use Taxon
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Uses of Taxon in org.biojava.bio.program.homologene
Classes in org.biojava.bio.program.homologene that implement TaxonFields in org.biojava.bio.program.homologene declared as TaxonModifier and TypeFieldDescriptionstatic final TaxonTaxon.A_THALIANAstatic final TaxonTaxon.B_TAURUSstatic final TaxonTaxon.C_ELEGANSstatic final TaxonTaxon.D_MELANOGASTERstatic final TaxonTaxon.D_RERIOstatic final TaxonTaxon.H_SAPIENSstatic final TaxonTaxon.H_VULGAREstatic final TaxonTaxon.L_ESCULENTUMstatic final TaxonTaxon.M_MUSCULUSstatic final TaxonTaxon.M_TRUNCULATAstatic final TaxonTaxon.O_SATIVAstatic final TaxonTaxon.R_NORVEGICUSstatic final TaxonTaxon.S_SCROFAstatic final TaxonTaxon.T_AESTIVUMstatic final TaxonTaxon.X_LAEVISstatic final TaxonTaxon.Z_MAYSMethods in org.biojava.bio.program.homologene that return TaxonModifier and TypeMethodDescriptionstatic TaxonHomologeneTools.createTaxon(int taxonID, String description) add a Taxonstatic TaxonHomologeneTools.getTaxon(int taxonID) get the Taxon corresponding to this Taxon IDOrthologue.getTaxon()return the Taxon associated with this orthologueSimpleOrthologue.getTaxon()Methods in org.biojava.bio.program.homologene with parameters of type TaxonModifier and TypeMethodDescriptionHomologeneDB.createOrthologue(Taxon taxon, String locusID, String homologeneID, String accession) Create an orthologue.SimpleHomologeneDB.createOrthologue(Taxon taxon, String locusID, String homologeneID, String accession) Constructors in org.biojava.bio.program.homologene with parameters of type Taxon