java.lang.Object

org.biojava.bio.program.tagvalue.SimpleTagValueWrapper

org.biojava.bio.program.tagvalue.RegexFieldFinder

All Implemented Interfaces:: TagValueListener, TagValueWrapper

public class RegexFieldFinder extends SimpleTagValueWrapper

Constructor Summary

Constructors

Constructor

Description

RegexFieldFinder(TagValueListener delegate, Pattern pattern, String[] tags, boolean inLine)

Creates a new RegexFiledFinder.
Method Summary

Modifier and Type

Method

Description

void

endTag()

End the current tag.

void

startTag(Object tag)

Start a new tag.

void

value(TagValueContext ctxt, Object val)

A value has been seen.

Methods inherited from class org.biojava.bio.program.tagvalue.SimpleTagValueWrapper
endRecord, getDelegate, setDelegate, startRecord

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details
- RegexFieldFinder
  
  public RegexFieldFinder(TagValueListener delegate, Pattern pattern, String[] tags, boolean inLine)
  
  Creates a new RegexFiledFinder.
  
  Parameters:
  
  delegate - the TagValueListener to forward events to
  
  pattern - a Pattern to match to values
  
  tags - an array of Strings giving tag names for each group in the pattern
  
  inLine - if false, an entire sub-document will be generated for the parent tag
Method Details
- startTag
  
  public void startTag(Object tag) throws ParserException
  
  Description copied from interface: TagValueListener
  
  Start a new tag.
  
  Specified by:
  
  startTag in interface TagValueListener
  
  Overrides:
  
  startTag in class SimpleTagValueWrapper
  
  Parameters:
  
  tag - the Object representing the new tag
  
  Throws:
  
  ParserException - if the tag could not be started
- endTag
  
  public void endTag() throws ParserException
  
  Description copied from interface: TagValueListener
  
  End the current tag.
  
  Specified by:
  
  endTag in interface TagValueListener
  
  Overrides:
  
  endTag in class SimpleTagValueWrapper
  
  Throws:
  
  ParserException - if the tag could not be ended
- value
  
  public void value(TagValueContext ctxt, Object val) throws ParserException
  
  Description copied from interface: TagValueListener
  
  A value has been seen.
  
  Specified by:
  
  value in interface TagValueListener
  
  Overrides:
  
  value in class SimpleTagValueWrapper
  
  Parameters:
  
  ctxt - a TagValueContext that could be used to push a sub-document
  
  val - the value Object observed
  
  Throws:
  
  ParserException - if the value could not be processed

Class RegexFieldFinder

Constructor Summary

Method Summary

Methods inherited from class org.biojava.bio.program.tagvalue.SimpleTagValueWrapper

Methods inherited from class java.lang.Object

Constructor Details

RegexFieldFinder

Method Details

startTag

endTag

value