Package org.biojava.bio.search
Interface SearchBuilder
- All Superinterfaces:
SearchContentHandler
- All Known Implementing Classes:
BlastLikeSearchBuilder
The
SearchBuilder interface is to be used by objects
which accumulate state via a SearchContentHandler and
then construct a SeqSimilaritySearchResult object.- Since:
- 1.1
- Author:
- Keith James
- See Also:
-
Method Summary
Modifier and TypeMethodDescriptionThemakeSearchResultmethod returns aSeqSimilaritySearchResultinstance created from accumulated data.Methods inherited from interface org.biojava.bio.search.SearchContentHandler
addHitProperty, addSearchProperty, addSubHitProperty, endHeader, endHit, endSearch, endSubHit, getMoreSearches, setDatabaseID, setMoreSearches, setQueryID, startHeader, startHit, startSearch, startSubHit
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Method Details
-
makeSearchResult
ThemakeSearchResultmethod returns aSeqSimilaritySearchResultinstance created from accumulated data.- Returns:
- a
SeqSimilaritySearchResult. - Throws:
BioException- if an error occurs.
-