Uses of Class
org.biojava.bio.seq.db.AbstractSequenceDB
Packages that use AbstractSequenceDB
Package
Description
Collections of biological sequence data.
Sequences and SequenceDBs which are composed from data taken
from a number of data sources.
-
Uses of AbstractSequenceDB in org.biojava.bio.seq.db
Subclasses of AbstractSequenceDB in org.biojava.bio.seq.dbModifier and TypeClassDescriptionclassSequenceDB implementation which lazily applies a SequenceAnnotator to sequences retrieved from a SequenceDB.classSequenceDB implementation that caches the results of another SequenceDB.classDummySequenceDBis an implementation which contains only aDummySequence.classAn implementation of SequenceDB that uses an underlying HashMap to store the sequence objects.final classThis class implements SequenceDB on top of a set of sequence files and sequence offsets within these files.classAn abstract implementation of SequenceDB that wraps up another database.classclassSequenceDB implementation that returns new SequenceView instances wrapping the sequences in an underlying database. -
Uses of AbstractSequenceDB in org.biojava.bio.seq.distributed
Subclasses of AbstractSequenceDB in org.biojava.bio.seq.distributedModifier and TypeClassDescriptionclassSequence database from the meta-DAS system.