org.biojava.bio.seq.db.flat (biojava-legacy 1.9.7 API)

package org.biojava.bio.seq.db.flat

Support for OBDA flatfile databases.

Related Packages

Package

Description

org.biojava.bio.seq.db

Collections of biological sequence data.

org.biojava.bio.seq.db.biofetch

Client for the OBDA BioFetch protocol.

org.biojava.bio.seq.db.biosql

General purpose Sequence storage in a relational database.

org.biojava.bio.seq.db.emblcd

Readers for the EMBL CD-ROM format binary index files used by EMBOSS and Staden packages.
Classes

Class

Description

FlatSequenceDB

FlatSequenceDB is an OBDA flatfile sequence databank implementation.

FlatSequenceDBProvider

FlatSequenceDBProvider directory-services plugin for flatfile databases.