Uses of Package org.biojava.bio.seq.impl (biojava-legacy 1.9.7 API)

Packages that use org.biojava.bio.seq.impl

Package

Description

org.biojava.bio.program.phred

Parser for Phred output

org.biojava.bio.seq

Classes and interfaces for defining biological sequences and informatics objects.

org.biojava.bio.seq.impl

Standard in-memory implementations of Sequence and Feature.

Classes in org.biojava.bio.seq.impl used by org.biojava.bio.program.phred

Class

Description

SimpleSequence

A basic implementation of the Sequence interface.
Classes in org.biojava.bio.seq.impl used by org.biojava.bio.seq

Class

Description

ViewSequence

A view onto another Sequence object.
Classes in org.biojava.bio.seq.impl used by org.biojava.bio.seq.impl

Class

Description

SimpleFeature

A no-frills implementation of a feature.

SimpleSequence

A basic implementation of the Sequence interface.

SimpleStrandedFeature

A no-frills implementation of StrandedFeature.