AGAVEEvidenceHandler (biojava-legacy 1.9.7 API)

java.lang.Object

org.biojava.bio.seq.io.agave.StAXContentHandlerBase

org.biojava.bio.seq.io.agave.StAXFeatureHandler

org.biojava.bio.seq.io.agave.AGAVEEvidenceHandler

All Implemented Interfaces:: AGAVEEvidenceCallbackItf, StAXContentHandler

public class AGAVEEvidenceHandler extends StAXFeatureHandler implements AGAVEEvidenceCallbackItf

Author:: Hanning Ni Doubletwist Inc

Field Summary

Fields

Modifier and Type

Field

Description

static final StAXHandlerFactory

AGAVE_EVIDENCE_HANDLER_FACTORY

Fields inherited from class org.biojava.bio.seq.io.agave.StAXFeatureHandler
annot, callbackStack, endLoc, featureListener, featureTemplate, myLocalName, stackLevel, startLoc, staxenv, subFeatures
Method Summary

Modifier and Type

Method

Description

void

addElementId(String id)

void

endElementHandler(String nsURI, String localName, String qName, StAXContentHandler handler)

Element specific exit handler Subclass to do anything useful.

Methods inherited from class org.biojava.bio.seq.io.agave.StAXFeatureHandler
addFeatureToSequence, addHandler, createTemplate, endElement, getFeatureListener, getHandlerStackIterator, getLevel, pop, push, realizeSubFeatures, setFeatureListener, setHandlerCharacteristics, setProperty, startElement, startElementHandler

Methods inherited from class org.biojava.bio.seq.io.agave.StAXContentHandlerBase
characters, endPrefixMapping, endTree, ignorableWhitespace, processingInstruction, setDocumentLocator, skippedEntity, startPrefixMapping, startTree

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Details
- AGAVE_EVIDENCE_HANDLER_FACTORY
  
  public static final StAXHandlerFactory AGAVE_EVIDENCE_HANDLER_FACTORY
Method Details
- addElementId
  
  public void addElementId(String id)
  
  Specified by:
  
  addElementId in interface AGAVEEvidenceCallbackItf
- endElementHandler
  
  public void endElementHandler(String nsURI, String localName, String qName, StAXContentHandler handler) throws SAXException
  
  Description copied from class: StAXFeatureHandler
  
  Element specific exit handler Subclass to do anything useful.
  
  Overrides:
  
  endElementHandler in class StAXFeatureHandler
  
  Throws:
  
  SAXException