Uses of Class
org.biojava.bio.seq.io.agave.StAXFeatureHandler
Packages that use StAXFeatureHandler
Package
Description
Classes for converting between AGAVE XML and BioJava objects.
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Uses of StAXFeatureHandler in org.biojava.bio.seq.io.agave
Subclasses of StAXFeatureHandler in org.biojava.bio.seq.io.agaveModifier and TypeClassDescriptionclassclassHandles the AGAVE <bio_sequence> elementclassHandles the AGAVE <bio_sequence> elementclassHandles the AGAVE <cds> elementclassHandles the AGAVE <chromosome> elementclassclassclassclassHandles the AGAVE <contig> elementclassclassclassclassclassHandles the root AGAVE element modified for agave formatclassHandles the AGAVE <mrna> elementclassHandles the AGAVE <predicted_protein> elementclassclassclassseq_featureclasssequence_mapclasstranscriptclassunordered_fragmentsFields in org.biojava.bio.seq.io.agave declared as StAXFeatureHandlerModifier and TypeFieldDescriptionprotected StAXFeatureHandlerStAXFeatureHandler.staxenvprotected StAXFeatureHandlerStAXPropertyHandler.staxenvMethods in org.biojava.bio.seq.io.agave with parameters of type StAXFeatureHandlerModifier and TypeMethodDescriptionStAXHandlerFactory.getHandler(StAXFeatureHandler staxenv) Return a suitable StAX content handler.