Package org.biojava.bio.symbol

Class RangeLocation

java.lang.Object
org.biojava.bio.symbol.AbstractLocation
org.biojava.bio.symbol.AbstractRangeLocation
org.biojava.bio.symbol.RangeLocation
All Implemented Interfaces:
Serializable, Location
Direct Known Subclasses:
MergeLocation
public class RangeLocation extends AbstractRangeLocation implements Serializable
A simple implementation of Location that contains all points between getMin and getMax inclusive.

This will in practice be the most commonly used pure-java implementation.

Author:
Matthew Pocock
See Also:

  • Constructor Details

  • Method Details

    • getMin

      public int getMin()
      Description copied from interface: Location
      The minimum position contained.

      WARNING: The location will not contain every point between getMin() and getMax() if isContiguous() is false. If isContiguous() does return false you should use the Iterator returned by blockIterator() to iterate over the minimum set of contiguous blocks that make up this Location

      Specified by:
      getMin in interface Location
      Returns:
      the minimum position contained

    • getMax

      public int getMax()
      Description copied from interface: Location
      The maximum position contained.

      WARNING: The location will not contain every point between getMin() and getMax() if isContiguous() is false. If isContiguous() does return false you should use the Iterator returned by blockIterator() to iterate over the minimum set of contiguous blocks that make up this Location

      Specified by:
      getMax in interface Location
      Returns:
      the maximum position contained

    • translate

      public Location translate(int dist)
      Description copied from interface: Location
      Create a location that is a translation of this location.
      Specified by:
      translate in interface Location
      Parameters:
      dist - the distance to translate (to the right)

    • toString

      public String toString()
      Overrides:
      toString in class Object