Uses of Package
org.biojava.directory
Packages that use org.biojava.directory
Package
Description
Client for the OBDA BioFetch protocol.
General purpose Sequence storage in a relational database.
Support for OBDA flatfile databases.
Open Bio Sequence Database Access (OBDA) registry support.
-
Classes in org.biojava.directory used by org.biojava.bio.seq.db.biofetchClassDescriptionA
RegistryExceptionthrown when the registry cannot find an implementation of a requestedSequenceDB.Interfaces for named resources that can provide sequences via a database given some configuration information as defined by the OBDA standard. -
Classes in org.biojava.directory used by org.biojava.bio.seq.db.biosqlClassDescriptionA
RegistryExceptionthrown when the registry cannot find an implementation of a requestedSequenceDB.Interfaces for named resources that can provide sequences via a database given some configuration information as defined by the OBDA standard. -
Classes in org.biojava.directory used by org.biojava.bio.seq.db.flatClassDescriptionA
RegistryExceptionthrown when the registry cannot find an implementation of a requestedSequenceDB.Interfaces for named resources that can provide sequences via a database given some configuration information as defined by the OBDA standard. -
Classes in org.biojava.directory used by org.biojava.directoryClassDescription
Registryis a factory which gets implementations of the BioJavaSequenceDBLiteinterface.The BioDirectory Registry is a simple system for specifying where to find services which provide sequence databases.ARegistryExceptionthrown when the registry cannot find an implementation of a requestedSequenceDB.