java.lang.Object

org.biojava.stats.svm.AbstractSVMClassifierModel

org.biojava.stats.svm.SimpleSVMClassifierModel

All Implemented Interfaces:: SVMClassifierModel

public class SimpleSVMClassifierModel extends AbstractSVMClassifierModel

A no-frills implementation of an SVM classifier model.

Author:: Matthew Pocock

Constructor Summary

Constructors

Constructor

Description

SimpleSVMClassifierModel(SVMKernel kernel)

SimpleSVMClassifierModel(SVMKernel kernel, Collection items)

SimpleSVMClassifierModel(SVMKernel kernel, SVMTarget target)
Method Summary

Modifier and Type

Method

Description

void

addItem(Object item)

void

addItemAlpha(Object item, double alpha)

void

clear()

double

getAlpha(Object item)

SVMKernel

getKernel()

double

getThreshold()

Set

itemAlphas()

Set

items()

void

removeItem(Object item)

void

setAlpha(Object item, double alpha)

void

setThreshold(double threshold)

Methods inherited from class org.biojava.stats.svm.AbstractSVMClassifierModel
classify, setThreshold

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details
- SimpleSVMClassifierModel
  
  public SimpleSVMClassifierModel(SVMKernel kernel)
- SimpleSVMClassifierModel
  
  public SimpleSVMClassifierModel(SVMKernel kernel, Collection items)
- SimpleSVMClassifierModel
  
  public SimpleSVMClassifierModel(SVMKernel kernel, SVMTarget target)
Method Details
- getKernel
  
  public SVMKernel getKernel()
- setThreshold
  
  public void setThreshold(double threshold)
- getThreshold
  
  public double getThreshold()
- items
  
  public Set items()
- itemAlphas
  
  public Set itemAlphas()
- getAlpha
  
  public double getAlpha(Object item)
- setAlpha
  
  public void setAlpha(Object item, double alpha)
  
  Specified by:
  
  setAlpha in interface SVMClassifierModel
  
  Overrides:
  
  setAlpha in class AbstractSVMClassifierModel
- addItem
  
  public void addItem(Object item)
  
  Specified by:
  
  addItem in interface SVMClassifierModel
  
  Overrides:
  
  addItem in class AbstractSVMClassifierModel
- addItemAlpha
  
  public void addItemAlpha(Object item, double alpha)
  
  Specified by:
  
  addItemAlpha in interface SVMClassifierModel
  
  Overrides:
  
  addItemAlpha in class AbstractSVMClassifierModel
- removeItem
  
  public void removeItem(Object item)
  
  Specified by:
  
  removeItem in interface SVMClassifierModel
  
  Overrides:
  
  removeItem in class AbstractSVMClassifierModel
- clear
  
  public void clear()
  
  Specified by:
  
  clear in interface SVMClassifierModel
  
  Overrides:
  
  clear in class AbstractSVMClassifierModel

Class SimpleSVMClassifierModel

Constructor Summary

Method Summary

Methods inherited from class org.biojava.stats.svm.AbstractSVMClassifierModel

Methods inherited from class java.lang.Object

Constructor Details

SimpleSVMClassifierModel

SimpleSVMClassifierModel

SimpleSVMClassifierModel

Method Details

getKernel

setThreshold

getThreshold

items

itemAlphas

getAlpha

setAlpha

addItem

addItemAlpha

removeItem

clear