Uses of Interface
org.biojava.utils.ChangeListener
Packages that use ChangeListener
Package
Description
The core classes that will be used throughout the bio packages.
Probability distributions over Alphabets.
Graphical displays of biological sequences and associated annotations.
Collections of biological sequence data.
Standard in-memory implementations of
Sequence and
Feature.Code for projecting Feature objects and systematically altering their
properties.
Representation of the Symbols that make up a sequence, and locations within
them.
Miscellaneous utility classes used by other BioJava components.
Rich implementations of Sequences, Locations and Features.
GA functions
-
Uses of ChangeListener in org.biojava.bio
Classes in org.biojava.bio that implement ChangeListenerModifier and TypeClassDescriptionstatic classDeprecated.protected classListener used to forward changes for any of the underlying annotations to listeners on this annotation.protected classForwards change events from the underlying Annotation to this one. -
Uses of ChangeListener in org.biojava.bio.dist
Classes in org.biojava.bio.dist that implement ChangeListenerModifier and TypeClassDescriptionstatic classDeprecated.usenew ChangeForwarder.Retyper(this, cs, Annotation.PROPERTY)instead -
Uses of ChangeListener in org.biojava.bio.gui.sequence
Classes in org.biojava.bio.gui.sequence that implement ChangeListenerModifier and TypeClassDescriptionstatic classPairwiseRendererForwarderforward events to other renderers.static classMethods in org.biojava.bio.gui.sequence with parameters of type ChangeListenerModifier and TypeMethodDescriptionvoidPairwiseSequencePanel.addChangeListener(ChangeListener cl) addChangeListeneradds a listener for all types of change.voidPairwiseSequencePanel.addChangeListener(ChangeListener cl, ChangeType ct) addChangeListeneradds a listener for specific types of change.voidSequencePanel.addChangeListener(ChangeListener cl) voidSequencePanel.addChangeListener(ChangeListener cl, ChangeType ct) voidSequencePoster.addChangeListener(ChangeListener cl) Deprecated.voidSequencePoster.addChangeListener(ChangeListener cl, ChangeType ct) Deprecated.voidTranslatedSequencePanel.addChangeListener(ChangeListener cl) addChangeListeneradds a listener for all types of change.voidTranslatedSequencePanel.addChangeListener(ChangeListener cl, ChangeType ct) addChangeListeneradds a listener for specific types of change.voidPairwiseSequencePanel.removeChangeListener(ChangeListener cl) removeChangeListenerremoves a listener.voidPairwiseSequencePanel.removeChangeListener(ChangeListener cl, ChangeType ct) removeChangeListenerremoves a listener.voidSequencePanel.removeChangeListener(ChangeListener cl) voidSequencePanel.removeChangeListener(ChangeListener cl, ChangeType ct) voidSequencePoster.removeChangeListener(ChangeListener cl) Deprecated.voidSequencePoster.removeChangeListener(ChangeListener cl, ChangeType ct) Deprecated.voidTranslatedSequencePanel.removeChangeListener(ChangeListener cl) removeChangeListenerremoves a listener.voidTranslatedSequencePanel.removeChangeListener(ChangeListener cl, ChangeType ct) removeChangeListenerremoves a listener. -
Uses of ChangeListener in org.biojava.bio.seq.db
Classes in org.biojava.bio.seq.db that implement ChangeListener -
Uses of ChangeListener in org.biojava.bio.seq.impl
Methods in org.biojava.bio.seq.impl with parameters of type ChangeListenerModifier and TypeMethodDescriptionfinal voidLazyFilterFeatureHolder.addChangeListener(ChangeListener cl) final voidLazyFilterFeatureHolder.addChangeListener(ChangeListener cl, ChangeType ct) voidSubSequence.addChangeListener(ChangeListener cl) voidSubSequence.addChangeListener(ChangeListener cl, ChangeType ct) final voidLazyFilterFeatureHolder.removeChangeListener(ChangeListener cl) final voidLazyFilterFeatureHolder.removeChangeListener(ChangeListener cl, ChangeType ct) voidSubSequence.removeChangeListener(ChangeListener cl) voidSubSequence.removeChangeListener(ChangeListener cl, ChangeType ct) -
Uses of ChangeListener in org.biojava.bio.seq.projection
Methods in org.biojava.bio.seq.projection with parameters of type ChangeListenerModifier and TypeMethodDescriptionvoidProjectedFeature.addChangeListener(ChangeListener cl) voidProjectedFeature.addChangeListener(ChangeListener cl, ChangeType ct) voidProjectionContext.addChangeListener(Feature projFeat, ChangeListener cl, ChangeType ct) Add a ChangeListener to a projected feature.final voidReparentContext.addChangeListener(Feature f, ChangeListener cl, ChangeType ct) voidProjectedFeature.removeChangeListener(ChangeListener cl) voidProjectedFeature.removeChangeListener(ChangeListener cl, ChangeType ct) voidProjectionContext.removeChangeListener(Feature projFeat, ChangeListener cl, ChangeType ct) Remove a ChangeListener from a projected feature.final voidReparentContext.removeChangeListener(Feature f, ChangeListener cl, ChangeType ct) -
Uses of ChangeListener in org.biojava.bio.symbol
Classes in org.biojava.bio.symbol that implement ChangeListenerModifier and TypeClassDescriptionclassThis adapter screens all edit events to see if they overlap with a window of interest.classThis translates edit events that fall within a window into window co-ordinates.classBasic implementation of SymbolList. -
Uses of ChangeListener in org.biojava.utils
Classes in org.biojava.utils that implement ChangeListenerModifier and TypeClassDescriptionclassThis is a ChangeListener that ignores everything.classThis is a ChangeListener that is designed to adapt events of one type from one source to events of another type emitted by another source.static classA ChangeForwarder that systematically uses a given type and wraps the old event.static classAn implementation that always vetoes everything.static classA listener that remembers the ChangeEvent of the last change.static classA listener that writes information about the event stream to a PrintStream.Fields in org.biojava.utils declared as ChangeListenerModifier and TypeFieldDescriptionstatic final ChangeListenerChangeListener.ALWAYS_VETOConvenience implementation which vetoes every change of which it is notified.static final ChangeListenerChangeListener.LOG_TO_OUTConvenience implementation that echoes all events to out.Methods in org.biojava.utils with parameters of type ChangeListenerModifier and TypeMethodDescriptionfinal voidAbstractChangeable.addChangeListener(ChangeListener cl) final voidAbstractChangeable.addChangeListener(ChangeListener cl, ChangeType ct) voidChangeable.addChangeListener(ChangeListener cl) Deprecated.use addChangeListener(cl, ChangeType.UNKNOWN)voidChangeable.addChangeListener(ChangeListener cl, ChangeType ct) Add a listener that will be informed of changes of a given type.voidChangeSupport.addChangeListener(ChangeListener cl) Add a listener that will be informed of all changes.voidChangeSupport.addChangeListener(ChangeListener cl, ChangeType ct) Add a listener that will be informed of changes of a given type (and it's subtypes)final voidUnchangeable.addChangeListener(ChangeListener cl) final voidUnchangeable.addChangeListener(ChangeListener cl, ChangeType ct) voidChangeHub.addListener(Object key, ChangeListener listener, ChangeType ct) add a ChangeListener associated with given key.voidIndexedChangeHub.addListener(Object key, ChangeListener listener, ChangeType ct) final voidAbstractChangeable.removeChangeListener(ChangeListener cl) final voidAbstractChangeable.removeChangeListener(ChangeListener cl, ChangeType ct) voidChangeable.removeChangeListener(ChangeListener cl) Deprecated.use removeChangeListener(cl, ChangeType.UNKNOWN)voidChangeable.removeChangeListener(ChangeListener cl, ChangeType ct) Remove a listener that was interested in a specific types of changes.voidChangeSupport.removeChangeListener(ChangeListener cl) Remove a listener that was interested in all types of changes.voidChangeSupport.removeChangeListener(ChangeListener cl, ChangeType ct) Remove a listener that was interested in a specific types of changes.final voidUnchangeable.removeChangeListener(ChangeListener cl) final voidUnchangeable.removeChangeListener(ChangeListener cl, ChangeType ct) voidChangeHub.removeListener(Object key, ChangeListener listener, ChangeType ct) remove a ChangeListener associated with given key.voidIndexedChangeHub.removeListener(Object key, ChangeListener listener, ChangeType ct) -
Uses of ChangeListener in org.biojavax.bio.seq
Methods in org.biojavax.bio.seq with parameters of type ChangeListenerModifier and TypeMethodDescriptionvoidInfinitelyAmbiguousSymbolList.addChangeListener(ChangeListener cl) Add a listener that will be informed of all changes.voidInfinitelyAmbiguousSymbolList.addChangeListener(ChangeListener cl, ChangeType ct) Add a listener that will be informed of changes of a given type.voidInfinitelyAmbiguousSymbolList.removeChangeListener(ChangeListener cl) Remove a listener that was interested in all types of changes.voidInfinitelyAmbiguousSymbolList.removeChangeListener(ChangeListener cl, ChangeType ct) Remove a listener that was interested in a specific types of changes. -
Uses of ChangeListener in org.biojavax.ga.functions
Methods in org.biojavax.ga.functions with parameters of type ChangeListenerModifier and TypeMethodDescriptionvoidCrossOverFunction.NoCross.addChangeListener(ChangeListener cl) voidCrossOverFunction.NoCross.addChangeListener(ChangeListener cl, ChangeType ct) voidMutationFunction.NoMutation.addChangeListener(ChangeListener cl) voidMutationFunction.NoMutation.addChangeListener(ChangeListener cl, ChangeType ct) voidCrossOverFunction.NoCross.removeChangeListener(ChangeListener c) voidCrossOverFunction.NoCross.removeChangeListener(ChangeListener cl, ChangeType ct) voidMutationFunction.NoMutation.removeChangeListener(ChangeListener c) voidMutationFunction.NoMutation.removeChangeListener(ChangeListener cl, ChangeType ct)
new ChangeForwarder.Retyper(source, cs, Annotation.PROPERTY)instead