Uses of Class
org.biojava.utils.ChangeSupport
Packages that use ChangeSupport
Package
Description
The core classes that will be used throughout the bio packages.
Probability distributions over Alphabets.
HMM and Dynamic Programming Algorithms.
Graphical displays of biological sequences and associated annotations.
Interfaces and classes for representing sequence similarity search results.
Classes and interfaces for defining biological sequences and informatics
objects.
Collections of biological sequence data.
Sequences and SequenceDBs which are composed from data taken
from a number of data sources.
Standard in-memory implementations of
Sequence and
Feature.Representation of the Symbols that make up a sequence, and locations within
them.
Taxonomy object for representing species information.
A general-purpose API for ontologies.
Miscellaneous utility classes used by other BioJava components.
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Uses of ChangeSupport in org.biojava.bio
Methods in org.biojava.bio that return ChangeSupportModifier and TypeMethodDescriptionprotected ChangeSupportMergeAnnotation.getChangeSupport(ChangeType changeType) protected ChangeSupportOverlayAnnotation.getChangeSupport(ChangeType changeType) Constructors in org.biojava.bio with parameters of type ChangeSupportModifierConstructorDescriptionAnnotationForwarder(Object source, ChangeSupport cs) Deprecated.Create a new AnnotationForwarder that will forward events for a source using a change support.PropertyForwarder(Object source, ChangeSupport cs) Create a new forwarder on behalf of a source using the change support.PropertyForwarder(Object source, ChangeSupport cs) Forward on behalf of source using the change support provided. -
Uses of ChangeSupport in org.biojava.bio.dist
Methods in org.biojava.bio.dist that return ChangeSupportModifier and TypeMethodDescriptionprotected ChangeSupportAbstractDistribution.getChangeSupport(ChangeType ct) protected ChangeSupportAbstractOrderNDistribution.getChangeSupport(ChangeType ct) protected ChangeSupportTranslatedDistribution.getChangeSupport(ChangeType ct) Constructors in org.biojava.bio.dist with parameters of type ChangeSupportModifierConstructorDescriptionNullModelForwarder(Object source, ChangeSupport cs) Deprecated.Create a new forwarder. -
Uses of ChangeSupport in org.biojava.bio.dp
Methods in org.biojava.bio.dp that return ChangeSupportModifier and TypeMethodDescriptionprotected ChangeSupportSimpleEmissionState.getChangeSupport(ChangeType ct) protected ChangeSupportSimpleMarkovModel.getChangeSupport(ChangeType ct) -
Uses of ChangeSupport in org.biojava.bio.gui.sequence
Methods in org.biojava.bio.gui.sequence that return ChangeSupportModifier and TypeMethodDescriptionprotected ChangeSupportLabelledSequenceRenderer.generateChangeSupport()protected ChangeSupportBumpedRenderer.getChangeSupport(ChangeType ct) protected ChangeSupportFeatureBlockSequenceRenderer.getChangeSupport(ChangeType ct) protected ChangeSupportFilteringRenderer.getChangeSupport(ChangeType ct) protected ChangeSupportMultiLineRenderer.getChangeSupport(ChangeType ct) protected ChangeSupportOverlayRendererWrapper.getChangeSupport(ChangeType ct) protected ChangeSupportPaddingRenderer.getChangeSupport(ChangeType ct) protected ChangeSupportPairwiseFilteringRenderer.getChangeSupport(ChangeType ct) protected ChangeSupportPairwiseOverlayRenderer.getChangeSupport(ChangeType ct) protected ChangeSupportPairwiseSequencePanel.getChangeSupport(ChangeType ct) getChangeSupportlazily instantiates a helper for change listeners.protected ChangeSupportSequencePanel.getChangeSupport(ChangeType ct) protected ChangeSupportSequencePoster.getChangeSupport(ChangeType ct) Deprecated.protected ChangeSupportSequenceRendererWrapper.getChangeSupport(ChangeType ct) protected ChangeSupportTranslatedSequencePanel.getChangeSupport(ChangeType ct) getChangeSupportlazily instantiates a helper for change listeners.Constructors in org.biojava.bio.gui.sequence with parameters of type ChangeSupportModifierConstructorDescriptionCreates a newPairwiseRendererForwarder.RendererForwarder(SequenceRenderer source, ChangeSupport cs) -
Uses of ChangeSupport in org.biojava.bio.search
Methods in org.biojava.bio.search that return ChangeSupportModifier and TypeMethodDescriptionprotected ChangeSupportSequenceDBSearchHit.getChangeSupport(ChangeType ct) Deprecated.protected ChangeSupportSequenceDBSearchResult.getChangeSupport(ChangeType ct) Deprecated.protected ChangeSupportSequenceDBSearchSubHit.getChangeSupport(ChangeType ct) Deprecated.protected ChangeSupportSimpleSeqSimilaritySearchHit.getChangeSupport(ChangeType ct) protected ChangeSupportSimpleSeqSimilaritySearchResult.getChangeSupport(ChangeType ct) protected ChangeSupportSimpleSeqSimilaritySearchSubHit.getChangeSupport(ChangeType ct) -
Uses of ChangeSupport in org.biojava.bio.seq
Methods in org.biojava.bio.seq that return ChangeSupportModifier and TypeMethodDescriptionprotected ChangeSupportFeatureTypes.RepositoryImpl.getChangeSupport(ChangeType ct) protected ChangeSupportLazyFeatureHolder.getChangeSupport(ChangeType ct) protected ChangeSupportNewSimpleAssembly.getChangeSupport(ChangeType ct) protected ChangeSupportSimpleAssembly.getChangeSupport(ChangeType ct) -
Uses of ChangeSupport in org.biojava.bio.seq.db
Methods in org.biojava.bio.seq.db that return ChangeSupportModifier and TypeMethodDescriptionprotected ChangeSupportSequenceDBWrapper.getChangeSupport(ChangeType ct) Constructors in org.biojava.bio.seq.db with parameters of type ChangeSupport -
Uses of ChangeSupport in org.biojava.bio.seq.distributed
Methods in org.biojava.bio.seq.distributed that return ChangeSupportModifier and TypeMethodDescriptionprotected ChangeSupportDistributedSequenceDB.getChangeSupport() -
Uses of ChangeSupport in org.biojava.bio.seq.impl
Methods in org.biojava.bio.seq.impl that return ChangeSupportModifier and TypeMethodDescriptionprotected ChangeSupportLazyFilterFeatureHolder.getChangeSupport()protected ChangeSupportSimpleFeature.getChangeSupport(ChangeType ct) protected ChangeSupportSimpleSequence.getChangeSupport(ChangeType ct) -
Uses of ChangeSupport in org.biojava.bio.symbol
Methods in org.biojava.bio.symbol that return ChangeSupportModifier and TypeMethodDescriptionprotected ChangeSupportAbstractSymbol.getChangeSupport(ChangeType changeType) protected ChangeSupportSimpleAlphabet.getChangeSupport(ChangeType ct) Constructors in org.biojava.bio.symbol with parameters of type ChangeSupportModifierConstructorDescriptionEditScreener(Object source, ChangeSupport cs, int min, int max) EditTranslater(Object source, ChangeSupport cs, int min, int max) -
Uses of ChangeSupport in org.biojava.bio.taxa
Methods in org.biojava.bio.taxa that return ChangeSupportModifier and TypeMethodDescriptionprotected ChangeSupportAbstractTaxon.getChangeSupport(ChangeType ct) Deprecated. -
Uses of ChangeSupport in org.biojava.ontology
Methods in org.biojava.ontology that return ChangeSupportModifier and TypeMethodDescriptionAbstractTerm.getChangeSupport(ChangeType ct) OntologyTerm.Impl.getChangeSupport(ChangeType ct) -
Uses of ChangeSupport in org.biojava.utils
Methods in org.biojava.utils that return ChangeSupportModifier and TypeMethodDescriptionChangeForwarder.changeSupport()Return the underlyingChangeSupportinstance that can be used to fireChangeEvents and mannage listeners.protected ChangeSupportAbstractChangeable.generateChangeSupport()Called the first time a ChangeSupport object is needed.protected ChangeSupportAbstractChangeable.getChangeSupport(ChangeType ct) Called to retrieve the ChangeSupport for this object.Constructors in org.biojava.utils with parameters of type ChangeSupportModifierConstructorDescriptionChangeForwarder(Object source, ChangeSupport changeSupport) Create a new ChangeForwarder for forwarding events.Retyper(Object source, ChangeSupport changeSupport, ChangeType type) Create a new Retyper for forwarding events.