Uses of Interface
org.biojava.utils.stax.DelegationManager
Packages that use DelegationManager
Package
Description
Parsers for the XML output from NCBI blast.
Creation of objects from SAX events using the BioJava BlastLikeDataSetCollection DTD.
Event-driven parsing system for the Extensible Feature Format (XFF).
Tools for reading and writing an XML representation of BioJava's FeatureFilter language.
Event-driven parsing system for the Gene Annotation Markup Elements (GAME).
Event-driven parsing system for the Gene Annotation Markup Elements (GAME).
The Stack API for XML (StAX).
-
Uses of DelegationManager in org.biojava.bio.program.sax.blastxml
Methods in org.biojava.bio.program.sax.blastxml with parameters of type DelegationManagerModifier and TypeMethodDescriptionvoidBlastXMLParser.startElement(String nsURI, String localName, String qName, Attributes attrs, DelegationManager dm) we override the superclass startElement method so we can determine the the start tag type and use it to set up delegation for the superclass. -
Uses of DelegationManager in org.biojava.bio.program.ssbind
Methods in org.biojava.bio.program.ssbind with parameters of type DelegationManagerModifier and TypeMethodDescriptionvoidSeqSimilarityStAXAdapter.startElement(String nsURI, String localName, String qName, Attributes attrs, DelegationManager dm) voidSeqSimilarityStAXHandler.startElement(String nsURI, String localName, String qName, Attributes attrs, DelegationManager dm) -
Uses of DelegationManager in org.biojava.bio.program.xff
Methods in org.biojava.bio.program.xff with parameters of type DelegationManagerModifier and TypeMethodDescriptionvoidFeatureHandler.startElement(String nsURI, String localName, String qName, Attributes attrs, DelegationManager dm) StAX callback for element starts.voidLocationHandlerBase.startElement(String nsURI, String localName, String qName, Attributes attrs, DelegationManager dm) voidPropDetailHandler.startElement(String nsURI, String localName, String qName, Attributes attrs, DelegationManager dm) voidStrandedFeatureHandler.startElement(String nsURI, String localName, String qName, Attributes attrs, DelegationManager dm) voidXFFFeatureSetHandler.startElement(String nsURI, String localName, String qName, Attributes attrs, DelegationManager dm) -
Uses of DelegationManager in org.biojava.bio.seq.io.filterxml
Methods in org.biojava.bio.seq.io.filterxml with parameters of type DelegationManagerModifier and TypeMethodDescriptionvoidXMLAnnotationTypeHandler.startElement(String nsURI, String localName, String qName, Attributes attrs, DelegationManager dm) -
Uses of DelegationManager in org.biojava.bio.seq.io.game
Methods in org.biojava.bio.seq.io.game with parameters of type DelegationManagerModifier and TypeMethodDescriptionvoidGAMEAspectPropHandler.startElement(String nsURI, String localName, String qName, Attributes attrs, DelegationManager dm) voidGAMEDescriptionPropHandler.startElement(String nsURI, String localName, String qName, Attributes attrs, DelegationManager dm) voidGAMENamePropHandler.startElement(String nsURI, String localName, String qName, Attributes attrs, DelegationManager dm) voidGAMEResiduesPropHandler.startElement(String nsURI, String localName, String qName, Attributes attrs, DelegationManager dm) voidGAMETypePropHandler.startElement(String nsURI, String localName, String qName, Attributes attrs, DelegationManager dm) voidSequenceContentHandlerBase.startElement(String nsURI, String localName, String qName, Attributes attrs, DelegationManager dm) voidStAXFeatureHandler.startElement(String nsURI, String localName, String qName, Attributes attrs, DelegationManager dm) Handles basic entry processing for all feature handlers.voidStAXPropertyHandler.startElement(String nsURI, String localName, String qName, Attributes attrs, DelegationManager dm) Override this to do any processing required but call this prior to returning.voidGAMEHandler.startElementHandler(String nsURI, String localName, String qName, Attributes attrs, DelegationManager dm) -
Uses of DelegationManager in org.biojava.bio.seq.io.game12
Methods in org.biojava.bio.seq.io.game12 with parameters of type DelegationManagerModifier and TypeMethodDescriptionvoidStAXFeatureHandler.startElement(String nsURI, String localName, String qName, Attributes attrs, DelegationManager dm) Handles basic entry processing for all feature handlers. -
Uses of DelegationManager in org.biojava.utils.stax
Methods in org.biojava.utils.stax with parameters of type DelegationManagerModifier and TypeMethodDescriptionvoidBooleanElementHandlerBase.startElement(String nsURI, String localName, String qName, Attributes attrs, DelegationManager dm) voidByteElementHandlerBase.startElement(String nsURI, String localName, String qName, Attributes attrs, DelegationManager dm) voidCharElementHandlerBase.startElement(String nsURI, String localName, String qName, Attributes attrs, DelegationManager dm) voidDoubleElementHandlerBase.startElement(String nsURI, String localName, String qName, Attributes attrs, DelegationManager dm) voidFloatElementHandlerBase.startElement(String nsURI, String localName, String qName, Attributes attrs, DelegationManager dm) voidIntElementHandlerBase.startElement(String nsURI, String localName, String qName, Attributes attrs, DelegationManager dm) voidLongElementHandlerBase.startElement(String nsURI, String localName, String qName, Attributes attrs, DelegationManager dm) voidStAXContentHandler.startElement(String nsURI, String localName, String qName, Attributes attrs, DelegationManager dm) voidStAXContentHandlerBase.startElement(String nsURI, String localName, String qName, Attributes attrs, DelegationManager dm) voidStringElementHandlerBase.startElement(String nsURI, String localName, String qName, Attributes attrs, DelegationManager dm)