Uses of Interface
org.biojavax.bio.BioEntryRelationship
Packages that use BioEntryRelationship
Package
Description
Classes to represent biological entities and their relationships.
Classes to support the I/O of RichSequence and
Bioentry objects.
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Uses of BioEntryRelationship in org.biojavax.bio
Classes in org.biojavax.bio that implement BioEntryRelationshipModifier and TypeClassDescriptionclassRepresents a relationship between two bioentries that is described by a term and given a rank.Methods in org.biojavax.bio that return types with arguments of type BioEntryRelationshipModifier and TypeMethodDescriptionBioEntry.getRelationships()Returns a set of all relationships associated with this bioentry.SimpleBioEntry.getRelationships()Returns a set of all relationships associated with this bioentry.Methods in org.biojavax.bio with parameters of type BioEntryRelationshipModifier and TypeMethodDescriptionvoidBioEntry.addRelationship(BioEntryRelationship relation) Adds a relation instance to this bioentry.voidSimpleBioEntry.addRelationship(BioEntryRelationship relation) Adds a relation instance to this bioentry.voidBioEntry.removeRelationship(BioEntryRelationship relation) Removes a relation instance from this bioentry.voidSimpleBioEntry.removeRelationship(BioEntryRelationship relation) Removes a relation instance from this bioentry. -
Uses of BioEntryRelationship in org.biojavax.bio.seq.io
Methods in org.biojavax.bio.seq.io with parameters of type BioEntryRelationshipModifier and TypeMethodDescriptionvoidDebuggingRichSeqIOListener.setRelationship(BioEntryRelationship relationship) voidRichSeqIOAdapter.setRelationship(BioEntryRelationship relationship) voidRichSeqIOListener.setRelationship(BioEntryRelationship relationship) Call back method so the event emitter can tell the listener about a relationship between the bioentry or sequence in the record being read and another bioentry.voidSimpleRichSequenceBuilder.setRelationship(BioEntryRelationship relationship) Call back method so the event emitter can tell the listener about a relationship between the bioentry or sequence in the record being read and another bioentry.