Uses of Interface
org.biojavax.bio.seq.PositionResolver
Packages that use PositionResolver
Package
Description
The Biojava extensions packages, classes that extend the core biojava
functionality
Rich implementations of Sequences, Locations and Features.
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Uses of PositionResolver in org.biojavax
Methods in org.biojavax that return PositionResolverModifier and TypeMethodDescriptionstatic PositionResolverRichObjectFactory.getDefaultPositionResolver()Returns the default position resolver object.Methods in org.biojavax with parameters of type PositionResolverModifier and TypeMethodDescriptionstatic voidRichObjectFactory.setDefaultPositionResolver(PositionResolver pr) Sets the default position resolver to use when creating new rich feature locations. -
Uses of PositionResolver in org.biojavax.bio.seq
Classes in org.biojavax.bio.seq that implement PositionResolverModifier and TypeClassDescriptionstatic classThe minimal resolver returns the base which provides the average range, halfway between maximal and minimal.static classThe maximal resolver returns the base which provides the largest possible range.static classThe minimal resolver returns the base which provides the smallest possible range.Methods in org.biojavax.bio.seq with parameters of type PositionResolverModifier and TypeMethodDescriptionvoidEmptyRichLocation.setPositionResolver(PositionResolver p) Sets the resolver to use when working out actual base coordinates from fuzzy positions.voidRichLocation.setPositionResolver(PositionResolver p) Sets the resolver to use when working out actual base coordinates from fuzzy positions.voidSimpleRichLocation.setPositionResolver(PositionResolver p) Sets the resolver to use when working out actual base coordinates from fuzzy positions.