Package org.biojavax.bio.seq.io
Class SimpleRichSequenceBuilderFactory
java.lang.Object
org.biojavax.bio.seq.io.SimpleRichSequenceBuilderFactory
- All Implemented Interfaces:
SequenceBuilderFactory,RichSequenceBuilderFactory
Generates RichSequenceBuilder objects.
- Since:
- 1.5
- Author:
- Mark Schreiber, Richard Holland
- See Also:
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Field Summary
Fields inherited from interface org.biojavax.bio.seq.io.RichSequenceBuilderFactory
FACTORY, PACKED, THRESHOLD, THRESHOLD_VALUE -
Constructor Summary
ConstructorsConstructorDescriptionCreates a new instance of SimpleRichSequenceBuilderFactoryCreates a new instance of SimpleRichSequenceBuilderFactorySimpleRichSequenceBuilderFactory(SymbolListFactory fact, int threshold) Creates a new instance of SimpleRichSequenceBuilderFactory that uses a specified factory forSymbolListslonger than a specified length. -
Method Summary
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Constructor Details
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SimpleRichSequenceBuilderFactory
public SimpleRichSequenceBuilderFactory()Creates a new instance of SimpleRichSequenceBuilderFactory -
SimpleRichSequenceBuilderFactory
Creates a new instance of SimpleRichSequenceBuilderFactory- Parameters:
fact- the factory to use when building theSymbolList.
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SimpleRichSequenceBuilderFactory
Creates a new instance of SimpleRichSequenceBuilderFactory that uses a specified factory forSymbolListslonger than a specified length. Before that aSimpleSymbolListFacotryis used.- Parameters:
fact- the factory to use when building theSymbolList.threshold- the threshold to exceed before using this factory
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Method Details
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makeSequenceBuilder
- Specified by:
makeSequenceBuilderin interfaceSequenceBuilderFactory
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