org.biojava3.genome.parsers.gff

Class GFF3Writer

java.lang.Object

org.biojava3.genome.parsers.gff.GFF3Writer

public class GFF3Writer
extends java.lang.Object

Author:

Scooter Willis

Constructor Summary

Constructors

Constructor and Description
GFF3Writer()

Method Summary

Methods

Modifier and Type	Method and Description
static void	main(java.lang.String[] args)
void	write(java.io.OutputStream outputStream, java.util.LinkedHashMap<java.lang.String,ChromosomeSequence> chromosomeSequenceList) Output gff3 format for a DNA Sequence

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

GFF3Writer

public GFF3Writer()

Method Detail

write

public void write(java.io.OutputStream outputStream,
         java.util.LinkedHashMap<java.lang.String,ChromosomeSequence> chromosomeSequenceList)
           throws java.lang.Exception

Output gff3 format for a DNA Sequence

Parameters:

fileName -

chromosomeSequence -

Throws:

java.lang.Exception

main

public static void main(java.lang.String[] args)
                 throws java.lang.Exception

Throws:

java.lang.Exception