org.biojava.nbio.structure.align.client

Class StructureName

java.lang.Object

org.biojava.nbio.structure.align.client.StructureName

All Implemented Interfaces:

java.io.Serializable, java.lang.Comparable<StructureName>

public class StructureName
extends java.lang.Object
implements java.lang.Comparable<StructureName>, java.io.Serializable

A utility class that makes working with names of structures, domains and ranges easier.

See Also:

the name. e.g. 4hhb, 4hhb.A, d4hhba_, PDP:4HHBAa etc., Serialized Form

Field Summary

Fields

Modifier and Type	Field and Description
protected java.lang.String	chainId
protected java.lang.String	name
protected java.lang.String	pdbId

Constructor Summary

Constructors

Constructor and Description
StructureName(java.lang.String name)

Method Summary

Methods

Modifier and Type	Method and Description
int	compareTo(StructureName o)
boolean	equals(java.lang.Object obj)
java.lang.String	getChainId()
java.lang.String	getName()
java.lang.String	getPdbId() PDB IDs are always returned as upper case
boolean	hasChainID()
int	hashCode()
boolean	isCathID()
boolean	isPdbId()
boolean	isPDPDomain()
boolean	isScopName()
java.lang.String	toString()

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Field Detail

name

protected java.lang.String name

pdbId

protected java.lang.String pdbId

chainId

protected java.lang.String chainId

Constructor Detail

StructureName

public StructureName(java.lang.String name)

Method Detail

getPdbId

public java.lang.String getPdbId()

PDB IDs are always returned as upper case

Returns:

upper case PDB ID

getChainId

public java.lang.String getChainId()

getName

public java.lang.String getName()

toString

public java.lang.String toString()

Overrides:

toString in class java.lang.Object

isScopName

public boolean isScopName()

hasChainID

public boolean hasChainID()

isPDPDomain

public boolean isPDPDomain()

hashCode

public int hashCode()

Overrides:

hashCode in class java.lang.Object

equals

public boolean equals(java.lang.Object obj)

Overrides:

equals in class java.lang.Object

compareTo

public int compareTo(StructureName o)

Specified by:

compareTo in interface java.lang.Comparable<StructureName>

isCathID

public boolean isCathID()

isPdbId

public boolean isPdbId()