| Class | Description |
|---|---|
| AFPChainCoordManager | |
| AligPanel |
A JPanel that can display an AFPChain in a nice way and interact with Jmol.
|
| AligPanelMouseMotionListener | |
| MultipleAlignmentCoordManager |
Generalization of the Coodinate Manager to include an arbitrary number of
sequences (lines) for MultipleAlignment visualization.
|
| MultipleAligPanel |
A JPanel that can display the sequence alignment of a
MultipleAlignment in a
nice way and interact with Jmol by selecting the aligned atoms of the sequence selection. |
| MultipleAligPanelMouseMotionListener |
Mouse Motion Listener for the
MultipleAligPanel, which provides methods to obtain
positions of the mouse and connect them to the sequence alignment positions using the information
in MultipleAlignmentCoordManager. |
| MultipleStatusDisplay |
This class provides information of the selected positions in the
MultipleAligPanel. |
| StatusDisplay |