org.biojava.nbio.structure.secstruc

Class SecStrucGroup

java.lang.Object

org.biojava.nbio.structure.HetatomImpl

org.biojava.nbio.structure.secstruc.SecStrucGroup

All Implemented Interfaces:

java.io.Serializable, Group

public class SecStrucGroup
extends HetatomImpl
implements Group

See Also:

Serialized Form

Field Summary

Fields inherited from class org.biojava.nbio.structure.HetatomImpl

atoms, pdb_flag, pdb_name, residueNumber, type

Constructor Summary

Constructors

Constructor and Description
SecStrucGroup()

Method Summary

Methods

Modifier and Type	Method and Description
Atom	getC()
Atom	getCA()
Atom	getH()
Atom	getN()
Atom	getO()
Group	getOriginal()
void	setC(Atom c)
void	setCA(Atom ca)
void	setH(Atom h)
void	setN(Atom n)
void	setO(Atom o)
void	setOriginal(Group original)
java.lang.String	toString()

Methods inherited from class org.biojava.nbio.structure.HetatomImpl

addAltLoc, addAtom, clearAtoms, clone, getAltLocGroup, getAltLocs, getAtom, getAtom, getAtoms, getChain, getChainId, getChemComp, getId, getPDBName, getProperties, getProperty, getResidueNumber, getType, has3D, hasAltLoc, hasAminoAtoms, hasAtom, isWater, iterator, setAtoms, setChain, setChemComp, setId, setPDBFlag, setPDBName, setProperties, setProperty, setResidueNumber, setResidueNumber, size, trimToSize

Methods inherited from class java.lang.Object

equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface org.biojava.nbio.structure.Group

addAltLoc, addAtom, clearAtoms, clone, getAltLocGroup, getAltLocs, getAtom, getAtom, getAtoms, getChain, getChainId, getChemComp, getPDBName, getProperties, getProperty, getResidueNumber, getType, has3D, hasAltLoc, hasAminoAtoms, hasAtom, isWater, iterator, setAtoms, setChain, setChemComp, setPDBFlag, setPDBName, setProperties, setProperty, setResidueNumber, setResidueNumber, size, trimToSize

Constructor Detail

SecStrucGroup

public SecStrucGroup()

Method Detail

toString

public java.lang.String toString()

Overrides:

toString in class HetatomImpl

getOriginal

public Group getOriginal()

setOriginal

public void setOriginal(Group original)

getC

public Atom getC()

setC

public void setC(Atom c)

getCA

public Atom getCA()

setCA

public void setCA(Atom ca)

getH

public Atom getH()

setH

public void setH(Atom h)

getN

public Atom getN()

setN

public void setN(Atom n)

getO

public Atom getO()

setO

public void setO(Atom o)