Constructor Detail

• BasicDomain

  public BasicDomain(java.lang.String id)

• BasicDomain

  public BasicDomain(java.lang.String id,
                     int from,
                     int to,
                     short number,
                     short total_count,
                     double per_domain_evalue,
                     double per_domain_score)

Method Detail

• compareTo

  public int compareTo(Domain domain)

  Basic domains are compared/sorted based upon their identifiers (case insensitive) and their numbers.

  Specified by:

  compareTo in interface java.lang.Comparable<Domain>

• equals

  public boolean equals(java.lang.Object o)

  Basic domains are considered equal if they have the same identifier (case sensitive).

  Overrides:

  equals in class java.lang.Object

• getDomainId

  public java.lang.String getDomainId()

  Specified by:

  getDomainId in interface Domain

• getFrom

  public int getFrom()

  Specified by:

  getFrom in interface Domain

• getLength

  public int getLength()

  Specified by:

  getLength in interface Domain

• getNumber

  public short getNumber()

  Specified by:

  getNumber in interface Domain

• getPerDomainEvalue

  public double getPerDomainEvalue()

  Specified by:

  getPerDomainEvalue in interface Domain

• getPerDomainScore

  public double getPerDomainScore()

  Specified by:

  getPerDomainScore in interface Domain

• getTo

  public int getTo()

  Specified by:

  getTo in interface Domain

• getTotalCount

  public short getTotalCount()

  Specified by:

  getTotalCount in interface Domain

• hashCode

  public int hashCode()

  Overrides:

  hashCode in class java.lang.Object

• toString

  public java.lang.String toString()

  Overrides:

  toString in class java.lang.Object

• toStringBuffer

  public java.lang.StringBuffer toStringBuffer()

• obtainIdAsShort

  public static final short obtainIdAsShort(java.lang.String id)

• obtainIdFromShort

  public static final java.lang.String obtainIdFromShort(short id)