java.lang.Object
- org.biojava.nbio.core.sequence.template.AbstractCompound

All Implemented Interfaces:

Compound

Direct Known Subclasses:

AminoAcidCompound, CodonCompound, NucleotideCompound
```
public abstract class AbstractCompound
extends java.lang.Object
implements Compound
```
The details of a Compound

Author:

Andy Yates

Constructor Summary

Constructors
Constructor Description

AbstractCompound()

AbstractCompound(java.lang.String base)

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`boolean`	`equals(java.lang.Object obj)`
`boolean`	`equalsIgnoreCase(Compound compound)`
`java.lang.String`	`getBase()`
`java.lang.String`	`getDescription()`
`java.lang.String`	`getLongName()`
`java.lang.Float`	`getMolecularWeight()`
`java.lang.String`	`getShortName()`
`java.lang.String`	`getUpperedBase()`
`int`	`hashCode()`
`void`	`setDescription(java.lang.String description)`
`void`	`setLongName(java.lang.String longName)`
`void`	`setMolecularWeight(java.lang.Float molecularWeight)`
`void`	`setShortName(java.lang.String shortName)`
`java.lang.String`	`toString()`

Methods inherited from class java.lang.Object
clone, finalize, getClass, notify, notifyAll, wait, wait, wait

- Constructor Detail
  - AbstractCompound
```
public AbstractCompound()
```
  - AbstractCompound
```
public AbstractCompound(java.lang.String base)
```
- Method Detail
  - getBase
```
public java.lang.String getBase()
```
  - getUpperedBase
```
public java.lang.String getUpperedBase()
```
  - getDescription
```
public java.lang.String getDescription()
```
    Specified by:
    
    getDescription in interface Compound
  - setDescription
```
public void setDescription(java.lang.String description)
```
    Specified by:
    
    setDescription in interface Compound
  - getShortName
```
public java.lang.String getShortName()
```
    Specified by:
    
    getShortName in interface Compound
  - setShortName
```
public void setShortName(java.lang.String shortName)
```
    Specified by:
    
    setShortName in interface Compound
  - getLongName
```
public java.lang.String getLongName()
```
    Specified by:
    
    getLongName in interface Compound
  - setLongName
```
public void setLongName(java.lang.String longName)
```
    Specified by:
    
    setLongName in interface Compound
  - getMolecularWeight
```
public java.lang.Float getMolecularWeight()
```
    Specified by:
    
    getMolecularWeight in interface Compound
  - setMolecularWeight
```
public void setMolecularWeight(java.lang.Float molecularWeight)
```
    Specified by:
    
    setMolecularWeight in interface Compound
  - toString
```
public java.lang.String toString()
```
    Overrides:
    
    toString in class java.lang.Object
  - equals
```
public boolean equals(java.lang.Object obj)
```
    Overrides:
    
    equals in class java.lang.Object
  - hashCode
```
public int hashCode()
```
    Overrides:
    
    hashCode in class java.lang.Object
  - equalsIgnoreCase
```
public boolean equalsIgnoreCase(Compound compound)
```
    Specified by:
    
    equalsIgnoreCase in interface Compound

Constructor	Description
`AbstractCompound()`
`AbstractCompound(java.lang.String base)`

Class AbstractCompound

Constructor Summary

Method Summary

Methods inherited from class java.lang.Object

Constructor Detail

AbstractCompound

AbstractCompound

Method Detail

getBase

getUpperedBase

getDescription

setDescription

getShortName

setShortName

getLongName

setLongName

getMolecularWeight

setMolecularWeight

toString

equals

hashCode

equalsIgnoreCase