Package org.forester.phylogeny.data

Class Point

java.lang.Object

org.forester.phylogeny.data.Point

All Implemented Interfaces:

PhylogenyData

public class Point
extends java.lang.Object
implements PhylogenyData

Field Summary

Fields

Modifier and Type	Field	Description
static java.lang.String	UNKNOWN_GEODETIC_DATUM

Constructor Summary

Constructors

Constructor	Description
Point()
Point(java.lang.String geodetic_datum, java.math.BigDecimal lat, java.math.BigDecimal longitude)
Point(java.lang.String geodetic_datum, java.math.BigDecimal lat, java.math.BigDecimal longitude, java.math.BigDecimal alt, java.lang.String alt_unit)

Method Summary

Modifier and Type	Method	Description
java.lang.StringBuffer	asSimpleText()
java.lang.StringBuffer	asText()
PhylogenyData	copy()	Creates a new PhylogenyData object with identical values as this PhylogenyData.
java.math.BigDecimal	getAltitude()
java.lang.String	getAltiudeUnit()
java.lang.String	getGeodeticDatum()
java.math.BigDecimal	getLatitude()
java.math.BigDecimal	getLongitude()
boolean	isEmpty()
boolean	isEqual(PhylogenyData point)	Compares this PhylogenyData to PhylogenyData data.
static boolean	isSeemsEmpty(Point p)
java.lang.StringBuffer	toNHX()
void	toPhyloXML(java.io.Writer writer, int level, java.lang.String indentation)	Writes a phyloXML representation of this phylogeny data.
java.lang.String	toString()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail

UNKNOWN_GEODETIC_DATUM

public static final java.lang.String UNKNOWN_GEODETIC_DATUM

See Also:

Constant Field Values

Constructor Detail

Point

public Point()

Point

public Point(java.lang.String geodetic_datum,
             java.math.BigDecimal lat,
             java.math.BigDecimal longitude)

Point

public Point(java.lang.String geodetic_datum,
             java.math.BigDecimal lat,
             java.math.BigDecimal longitude,
             java.math.BigDecimal alt,
             java.lang.String alt_unit)

Method Detail

isEmpty

public boolean isEmpty()

asSimpleText

public java.lang.StringBuffer asSimpleText()

Specified by:

asSimpleText in interface PhylogenyData

asText

public java.lang.StringBuffer asText()

Specified by:

asText in interface PhylogenyData

copy

public PhylogenyData copy()

Description copied from interface: PhylogenyData

Creates a new PhylogenyData object with identical values as this PhylogenyData. This ~should~ return a deep copy, but not there yet.

Specified by:

copy in interface PhylogenyData

Returns:

a ~deep~ copy of this PhylogenyData

getAltitude

public java.math.BigDecimal getAltitude()

getAltiudeUnit

public java.lang.String getAltiudeUnit()

getGeodeticDatum

public java.lang.String getGeodeticDatum()

getLatitude

public java.math.BigDecimal getLatitude()

getLongitude

public java.math.BigDecimal getLongitude()

isEqual

public boolean isEqual(PhylogenyData point)

Description copied from interface: PhylogenyData

Compares this PhylogenyData to PhylogenyData data. In general, this should return true if and only if all fiels are exactly identical.

Specified by:

isEqual in interface PhylogenyData

Returns:

in general, true if and only if all fiels are exactly identical, false otherwise

toNHX

public java.lang.StringBuffer toNHX()

Specified by:

toNHX in interface PhylogenyData

toPhyloXML

public void toPhyloXML(java.io.Writer writer,
                       int level,
                       java.lang.String indentation)
                throws java.io.IOException

Description copied from interface: PhylogenyData

Writes a phyloXML representation of this phylogeny data.

Specified by:

toPhyloXML in interface PhylogenyData

Throws:

java.io.IOException

toString

public java.lang.String toString()

Overrides:

toString in class java.lang.Object

isSeemsEmpty

public static final boolean isSeemsEmpty(Point p)